Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm27430-201ENSMUST00000184585 107 ntBASIC16.07■□□□□ 0.16
Lig3P97386 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lig3P97386 Gm44333-201ENSMUST00000197168 107 ntBASIC16.07■□□□□ 0.16
Lig3P97386 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lig3P97386 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lig3P97386 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Lig3P97386 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Lig3P97386 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.07■□□□□ 0.16
Lig3P97386 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lig3P97386 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Lig3P97386 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lig3P97386 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lig3P97386 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lig3P97386 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lig3P97386 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lig3P97386 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.07■□□□□ 0.16
Lig3P97386 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.07■□□□□ 0.16
Lig3P97386 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lig3P97386 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Lig3P97386 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lig3P97386 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Lig3P97386 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lig3P97386 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Lig3P97386 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.06■□□□□ 0.16
Lig3P97386 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lig3P97386 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.06■□□□□ 0.16
Lig3P97386 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
Lig3P97386 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.06■□□□□ 0.16
Lig3P97386 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Lig3P97386 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.06■□□□□ 0.16
Lig3P97386 Gm5866-201ENSMUST00000177881 973 ntBASIC16.06■□□□□ 0.16
Lig3P97386 Gm7774-201ENSMUST00000200064 533 ntBASIC16.06■□□□□ 0.16
Lig3P97386 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.06■□□□□ 0.16
Lig3P97386 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.06■□□□□ 0.16
Lig3P97386 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Lig3P97386 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lig3P97386 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Lig3P97386 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.06■□□□□ 0.16
Lig3P97386 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lig3P97386 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lig3P97386 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lig3P97386 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lig3P97386 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.05■□□□□ 0.16
Lig3P97386 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.05■□□□□ 0.16
Lig3P97386 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Lig3P97386 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lig3P97386 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lig3P97386 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lig3P97386 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lig3P97386 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.05■□□□□ 0.16
Lig3P97386 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lig3P97386 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Lig3P97386 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.05■□□□□ 0.16
Lig3P97386 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.05■□□□□ 0.16
Lig3P97386 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.05■□□□□ 0.16
Lig3P97386 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lig3P97386 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lig3P97386 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Lig3P97386 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Lig3P97386 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.05■□□□□ 0.16
Lig3P97386 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lig3P97386 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lig3P97386 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lig3P97386 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.05■□□□□ 0.16
Lig3P97386 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lig3P97386 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Lig3P97386 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lig3P97386 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lig3P97386 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lig3P97386 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lig3P97386 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lig3P97386 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lig3P97386 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lig3P97386 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.04■□□□□ 0.16
Lig3P97386 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lig3P97386 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.04■□□□□ 0.16
Lig3P97386 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lig3P97386 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Lig3P97386 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.04■□□□□ 0.16
Lig3P97386 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lig3P97386 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms