Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
PrkdcP97313 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC9.82□□□□□ -0.84
PrkdcP97313 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
PrkdcP97313 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC9.82□□□□□ -0.84
PrkdcP97313 Gm6023-201ENSMUST00000118217 606 ntBASIC9.82□□□□□ -0.84
PrkdcP97313 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC9.82□□□□□ -0.84
PrkdcP97313 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC9.82□□□□□ -0.84
PrkdcP97313 Gm44397-201ENSMUST00000195950 113 ntBASIC9.82□□□□□ -0.84
PrkdcP97313 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9.82□□□□□ -0.84
PrkdcP97313 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
PrkdcP97313 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC9.82□□□□□ -0.84
PrkdcP97313 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC9.82□□□□□ -0.84
PrkdcP97313 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC9.82□□□□□ -0.84
PrkdcP97313 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
PrkdcP97313 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
PrkdcP97313 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Gm2606-201ENSMUST00000100754 1002 ntBASIC9.81□□□□□ -0.84
PrkdcP97313 Gm12537-201ENSMUST00000119266 1002 ntBASIC9.81□□□□□ -0.84
PrkdcP97313 Gm12070-201ENSMUST00000119551 1002 ntBASIC9.81□□□□□ -0.84
PrkdcP97313 Gm12671-201ENSMUST00000119978 1002 ntBASIC9.81□□□□□ -0.84
PrkdcP97313 Gm13292-201ENSMUST00000120014 1000 ntBASIC9.81□□□□□ -0.84
PrkdcP97313 Mir5120-201ENSMUST00000175020 78 ntBASIC9.81□□□□□ -0.84
PrkdcP97313 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC9.81□□□□□ -0.84
PrkdcP97313 Gm10359-201ENSMUST00000180167 1002 ntBASIC9.81□□□□□ -0.84
PrkdcP97313 Gm12033-201ENSMUST00000180654 1002 ntBASIC9.81□□□□□ -0.84
PrkdcP97313 Gm5559-201ENSMUST00000180755 1002 ntBASIC9.81□□□□□ -0.84
PrkdcP97313 Gm21470-201ENSMUST00000187680 696 ntBASIC9.81□□□□□ -0.84
PrkdcP97313 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.81□□□□□ -0.84
PrkdcP97313 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC9.81□□□□□ -0.84
PrkdcP97313 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC9.81□□□□□ -0.84
PrkdcP97313 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
PrkdcP97313 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
PrkdcP97313 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Gm8749-201ENSMUST00000117737 331 ntBASIC9.81□□□□□ -0.84
PrkdcP97313 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC9.81□□□□□ -0.84
PrkdcP97313 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
PrkdcP97313 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
PrkdcP97313 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
PrkdcP97313 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9.81□□□□□ -0.84
PrkdcP97313 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC9.81□□□□□ -0.84
PrkdcP97313 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
PrkdcP97313 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
PrkdcP97313 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
PrkdcP97313 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
PrkdcP97313 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
PrkdcP97313 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Gm20628-201ENSMUST00000177363 3215 ntBASIC9.8□□□□□ -0.84
PrkdcP97313 Gm24255-201ENSMUST00000104481 128 ntBASIC9.8□□□□□ -0.84
PrkdcP97313 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
PrkdcP97313 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
PrkdcP97313 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
PrkdcP97313 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Gm4271-201ENSMUST00000174444 973 ntBASIC9.8□□□□□ -0.84
PrkdcP97313 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC9.8□□□□□ -0.84
PrkdcP97313 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
PrkdcP97313 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms