Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm21198-201ENSMUST00000188393 696 ntBASIC15.91■□□□□ 0.14
CiitaP79621 Gm21749-201ENSMUST00000189343 696 ntBASIC15.91■□□□□ 0.14
CiitaP79621 Gm21901-201ENSMUST00000189568 696 ntBASIC15.91■□□□□ 0.14
CiitaP79621 Gm29424-201ENSMUST00000189716 696 ntBASIC15.91■□□□□ 0.14
CiitaP79621 Gm28599-201ENSMUST00000189838 694 ntBASIC15.91■□□□□ 0.14
CiitaP79621 Gm21867-201ENSMUST00000189917 696 ntBASIC15.91■□□□□ 0.14
CiitaP79621 Gm29269-201ENSMUST00000190087 696 ntBASIC15.91■□□□□ 0.14
CiitaP79621 Gm21722-201ENSMUST00000190153 696 ntBASIC15.91■□□□□ 0.14
CiitaP79621 Gm28423-201ENSMUST00000190701 696 ntBASIC15.91■□□□□ 0.14
CiitaP79621 Gm21899-201ENSMUST00000190745 696 ntBASIC15.91■□□□□ 0.14
CiitaP79621 Gm21910-201ENSMUST00000191163 696 ntBASIC15.91■□□□□ 0.14
CiitaP79621 Gm21849-201ENSMUST00000191571 696 ntBASIC15.91■□□□□ 0.14
CiitaP79621 Gm28678-201ENSMUST00000191593 696 ntBASIC15.91■□□□□ 0.14
CiitaP79621 Gm20910-201ENSMUST00000193268 696 ntBASIC15.91■□□□□ 0.14
CiitaP79621 Gm21871-201ENSMUST00000194621 696 ntBASIC15.91■□□□□ 0.14
CiitaP79621 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Gm20949-201ENSMUST00000206478 952 ntBASIC15.91■□□□□ 0.14
CiitaP79621 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CiitaP79621 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
CiitaP79621 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.91■□□□□ 0.14
CiitaP79621 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CiitaP79621 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CiitaP79621 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.9■□□□□ 0.14
CiitaP79621 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CiitaP79621 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.9■□□□□ 0.14
CiitaP79621 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CiitaP79621 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CiitaP79621 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.89■□□□□ 0.13
CiitaP79621 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
CiitaP79621 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.89■□□□□ 0.13
CiitaP79621 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.89■□□□□ 0.13
CiitaP79621 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.89■□□□□ 0.13
CiitaP79621 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CiitaP79621 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
CiitaP79621 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
CiitaP79621 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CiitaP79621 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CiitaP79621 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.88■□□□□ 0.13
CiitaP79621 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CiitaP79621 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CiitaP79621 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CiitaP79621 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CiitaP79621 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CiitaP79621 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CiitaP79621 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CiitaP79621 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms