Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.26□□□□□ -0.45
Lsm5P62322 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm5P62322 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.26□□□□□ -0.45
Lsm5P62322 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.25□□□□□ -0.45
Lsm5P62322 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Lsm5P62322 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.25□□□□□ -0.45
Lsm5P62322 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Lsm5P62322 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.25□□□□□ -0.45
Lsm5P62322 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.25□□□□□ -0.45
Lsm5P62322 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.25□□□□□ -0.45
Lsm5P62322 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.25□□□□□ -0.45
Lsm5P62322 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 Gm7889-201ENSMUST00000185591 958 ntBASIC12.25□□□□□ -0.45
Lsm5P62322 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.25□□□□□ -0.45
Lsm5P62322 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.25□□□□□ -0.45
Lsm5P62322 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.25□□□□□ -0.45
Lsm5P62322 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Lsm5P62322 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Lsm5P62322 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.25□□□□□ -0.45
Lsm5P62322 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm5P62322 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.24□□□□□ -0.45
Lsm5P62322 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Lsm5P62322 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Lsm5P62322 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.24□□□□□ -0.45
Lsm5P62322 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.24□□□□□ -0.45
Lsm5P62322 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.24□□□□□ -0.45
Lsm5P62322 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Lsm5P62322 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Lsm5P62322 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm5P62322 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm5P62322 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.23□□□□□ -0.45
Lsm5P62322 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms