Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Lhx3P50481 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx3P50481 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx3P50481 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Lhx3P50481 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Lhx3P50481 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx3P50481 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.88□□□□□ -0.03
Lhx3P50481 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Lhx3P50481 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx3P50481 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx3P50481 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx3P50481 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx3P50481 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx3P50481 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx3P50481 Gm15693-201ENSMUST00000120470 637 ntBASIC14.88□□□□□ -0.03
Lhx3P50481 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Lhx3P50481 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx3P50481 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.88□□□□□ -0.03
Lhx3P50481 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx3P50481 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.88□□□□□ -0.03
Lhx3P50481 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx3P50481 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.88□□□□□ -0.03
Lhx3P50481 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.88□□□□□ -0.03
Lhx3P50481 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Lhx3P50481 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx3P50481 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx3P50481 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Lhx3P50481 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.88□□□□□ -0.03
Lhx3P50481 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx3P50481 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Lhx3P50481 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Lhx3P50481 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx3P50481 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx3P50481 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx3P50481 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Lhx3P50481 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Lhx3P50481 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx3P50481 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx3P50481 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx3P50481 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx3P50481 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx3P50481 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Lhx3P50481 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.87□□□□□ -0.03
Lhx3P50481 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.87□□□□□ -0.03
Lhx3P50481 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.87□□□□□ -0.03
Lhx3P50481 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx3P50481 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx3P50481 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.87□□□□□ -0.03
Lhx3P50481 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.87□□□□□ -0.03
Lhx3P50481 Gm18766-201ENSMUST00000189811 808 ntBASIC14.87□□□□□ -0.03
Lhx3P50481 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.87□□□□□ -0.03
Lhx3P50481 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx3P50481 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx3P50481 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx3P50481 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Lhx3P50481 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Lhx3P50481 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.87□□□□□ -0.03
Lhx3P50481 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx3P50481 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx3P50481 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lhx3P50481 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx3P50481 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx3P50481 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx3P50481 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Lhx3P50481 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Lhx3P50481 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Lhx3P50481 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.86□□□□□ -0.03
Lhx3P50481 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.86□□□□□ -0.03
Lhx3P50481 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx3P50481 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx3P50481 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx3P50481 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Lhx3P50481 Gm13823-201ENSMUST00000119930 345 ntBASIC14.86□□□□□ -0.03
Lhx3P50481 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx3P50481 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.86□□□□□ -0.03
Lhx3P50481 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx3P50481 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.86□□□□□ -0.03
Lhx3P50481 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx3P50481 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx3P50481 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx3P50481 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.86□□□□□ -0.03
Lhx3P50481 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx3P50481 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Lhx3P50481 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Lhx3P50481 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx3P50481 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx3P50481 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lhx3P50481 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lhx3P50481 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Lhx3P50481 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lhx3P50481 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Lhx3P50481 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lhx3P50481 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lhx3P50481 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lhx3P50481 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Lhx3P50481 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lhx3P50481 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lhx3P50481 Gm6415-201ENSMUST00000118488 348 ntBASIC14.85□□□□□ -0.03
Lhx3P50481 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Lhx3P50481 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms