Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Brca1P48754 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Brca1P48754 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brca1P48754 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brca1P48754 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brca1P48754 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brca1P48754 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Brca1P48754 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Brca1P48754 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brca1P48754 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.23■□□□□ 0.19
Brca1P48754 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Brca1P48754 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Brca1P48754 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.23■□□□□ 0.19
Brca1P48754 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Brca1P48754 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brca1P48754 Gm27486-201ENSMUST00000184923 80 ntBASIC16.23■□□□□ 0.19
Brca1P48754 Gm19078-201ENSMUST00000206311 727 ntBASIC16.23■□□□□ 0.19
Brca1P48754 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Brca1P48754 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Brca1P48754 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Brca1P48754 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Brca1P48754 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brca1P48754 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Brca1P48754 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.23■□□□□ 0.19
Brca1P48754 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brca1P48754 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Brca1P48754 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Brca1P48754 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brca1P48754 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Brca1P48754 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brca1P48754 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brca1P48754 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Brca1P48754 Mir3547-201ENSMUST00000175461 88 ntBASIC16.22■□□□□ 0.19
Brca1P48754 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.22■□□□□ 0.19
Brca1P48754 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Brca1P48754 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brca1P48754 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.22■□□□□ 0.19
Brca1P48754 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Brca1P48754 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brca1P48754 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brca1P48754 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brca1P48754 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.22■□□□□ 0.19
Brca1P48754 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brca1P48754 BC037039-201ENSMUST00000192003 2205 ntBASIC16.22■□□□□ 0.19
Brca1P48754 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Brca1P48754 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brca1P48754 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brca1P48754 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brca1P48754 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.22■□□□□ 0.19
Brca1P48754 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.22■□□□□ 0.19
Brca1P48754 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brca1P48754 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brca1P48754 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Brca1P48754 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Brca1P48754 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Brca1P48754 Gm27572-201ENSMUST00000183702 255 ntBASIC16.22■□□□□ 0.19
Brca1P48754 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Brca1P48754 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Brca1P48754 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC16.22■□□□□ 0.19
Brca1P48754 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.22■□□□□ 0.19
Brca1P48754 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Brca1P48754 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Brca1P48754 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brca1P48754 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Brca1P48754 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Brca1P48754 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brca1P48754 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Brca1P48754 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Brca1P48754 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brca1P48754 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brca1P48754 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brca1P48754 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brca1P48754 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brca1P48754 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Brca1P48754 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brca1P48754 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.21■□□□□ 0.19
Brca1P48754 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Brca1P48754 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brca1P48754 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brca1P48754 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Brca1P48754 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brca1P48754 Gm11814-201ENSMUST00000119515 929 ntBASIC16.21■□□□□ 0.19
Brca1P48754 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.21■□□□□ 0.19
Brca1P48754 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Brca1P48754 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Brca1P48754 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC16.21■□□□□ 0.19
Brca1P48754 Gm8652-201ENSMUST00000181363 964 ntBASIC16.21■□□□□ 0.19
Brca1P48754 Gm4804-201ENSMUST00000182234 999 ntBASIC16.21■□□□□ 0.19
Brca1P48754 Gm21470-201ENSMUST00000187680 696 ntBASIC16.21■□□□□ 0.19
Brca1P48754 Gm42442-201ENSMUST00000197951 1133 ntBASIC16.21■□□□□ 0.19
Brca1P48754 AC159747.1-201ENSMUST00000219903 265 ntBASIC16.21■□□□□ 0.19
Brca1P48754 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brca1P48754 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brca1P48754 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Brca1P48754 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Brca1P48754 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brca1P48754 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Brca1P48754 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Brca1P48754 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Brca1P48754 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.21■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms