Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.15□□□□□ -0.14
Prox1P48437 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Prox1P48437 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.14□□□□□ -0.15
Prox1P48437 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prox1P48437 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prox1P48437 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prox1P48437 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prox1P48437 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Prox1P48437 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.14□□□□□ -0.15
Prox1P48437 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Prox1P48437 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prox1P48437 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prox1P48437 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Prox1P48437 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prox1P48437 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.14□□□□□ -0.15
Prox1P48437 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.14□□□□□ -0.15
Prox1P48437 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.14□□□□□ -0.15
Prox1P48437 Gm28033-201ENSMUST00000184224 96 ntBASIC14.14□□□□□ -0.15
Prox1P48437 Gm7506-201ENSMUST00000207758 815 ntBASIC14.14□□□□□ -0.15
Prox1P48437 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.14□□□□□ -0.15
Prox1P48437 Gm8655-201ENSMUST00000221159 852 ntBASIC14.14□□□□□ -0.15
Prox1P48437 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.14□□□□□ -0.15
Prox1P48437 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prox1P48437 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.14□□□□□ -0.15
Prox1P48437 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prox1P48437 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prox1P48437 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prox1P48437 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.14□□□□□ -0.15
Prox1P48437 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Prox1P48437 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prox1P48437 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Prox1P48437 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.14□□□□□ -0.15
Prox1P48437 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prox1P48437 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prox1P48437 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prox1P48437 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prox1P48437 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Prox1P48437 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.13□□□□□ -0.15
Prox1P48437 Carlr-201ENSMUST00000181515 2574 ntBASIC14.13□□□□□ -0.15
Prox1P48437 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Prox1P48437 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.13□□□□□ -0.15
Prox1P48437 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Prox1P48437 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.13□□□□□ -0.15
Prox1P48437 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.13□□□□□ -0.15
Prox1P48437 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.13□□□□□ -0.15
Prox1P48437 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Prox1P48437 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prox1P48437 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prox1P48437 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prox1P48437 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.12□□□□□ -0.15
Prox1P48437 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prox1P48437 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prox1P48437 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prox1P48437 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.12□□□□□ -0.15
Prox1P48437 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prox1P48437 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prox1P48437 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Prox1P48437 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prox1P48437 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prox1P48437 Gm7153-201ENSMUST00000117092 455 ntBASIC14.12□□□□□ -0.15
Prox1P48437 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.12□□□□□ -0.15
Prox1P48437 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prox1P48437 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prox1P48437 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Prox1P48437 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prox1P48437 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Prox1P48437 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.12□□□□□ -0.15
Prox1P48437 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prox1P48437 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prox1P48437 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prox1P48437 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Prox1P48437 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.11□□□□□ -0.15
Prox1P48437 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prox1P48437 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms