Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TgfaP48030 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.72□□□□□ -0.37
TgfaP48030 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.72□□□□□ -0.37
TgfaP48030 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.72□□□□□ -0.37
TgfaP48030 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.72□□□□□ -0.37
TgfaP48030 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TgfaP48030 Gm18624-201ENSMUST00000220966 658 ntBASIC12.72□□□□□ -0.37
TgfaP48030 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.72□□□□□ -0.37
TgfaP48030 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TgfaP48030 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TgfaP48030 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TgfaP48030 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TgfaP48030 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TgfaP48030 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
TgfaP48030 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TgfaP48030 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TgfaP48030 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.72□□□□□ -0.37
TgfaP48030 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TgfaP48030 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TgfaP48030 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TgfaP48030 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TgfaP48030 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TgfaP48030 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TgfaP48030 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
TgfaP48030 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TgfaP48030 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.71□□□□□ -0.37
TgfaP48030 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.71□□□□□ -0.37
TgfaP48030 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.71□□□□□ -0.37
TgfaP48030 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.71□□□□□ -0.37
TgfaP48030 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.71□□□□□ -0.37
TgfaP48030 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.71□□□□□ -0.37
TgfaP48030 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.71□□□□□ -0.37
TgfaP48030 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.71□□□□□ -0.37
TgfaP48030 Mir1938-201ENSMUST00000158746 100 ntBASIC12.71□□□□□ -0.37
TgfaP48030 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
TgfaP48030 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Mir7085-201ENSMUST00000184353 66 ntBASIC12.71□□□□□ -0.37
TgfaP48030 Gm10766-202ENSMUST00000194123 606 ntBASIC12.71□□□□□ -0.37
TgfaP48030 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.71□□□□□ -0.37
TgfaP48030 Gm6266-201ENSMUST00000203844 806 ntBASIC12.71□□□□□ -0.37
TgfaP48030 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.71□□□□□ -0.37
TgfaP48030 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.71□□□□□ -0.37
TgfaP48030 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.71□□□□□ -0.37
TgfaP48030 Gm9899-201ENSMUST00000065519 555 ntBASIC12.71□□□□□ -0.37
TgfaP48030 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TgfaP48030 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
TgfaP48030 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TgfaP48030 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TgfaP48030 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TgfaP48030 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TgfaP48030 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TgfaP48030 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TgfaP48030 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TgfaP48030 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.71□□□□□ -0.38
TgfaP48030 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
TgfaP48030 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.71□□□□□ -0.38
TgfaP48030 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TgfaP48030 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TgfaP48030 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TgfaP48030 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.7□□□□□ -0.38
TgfaP48030 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TgfaP48030 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TgfaP48030 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
TgfaP48030 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.7□□□□□ -0.38
TgfaP48030 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TgfaP48030 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TgfaP48030 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TgfaP48030 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TgfaP48030 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
TgfaP48030 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
TgfaP48030 Gm13464-201ENSMUST00000119418 935 ntBASIC12.7□□□□□ -0.38
TgfaP48030 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.7□□□□□ -0.38
TgfaP48030 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TgfaP48030 Gm19220-201ENSMUST00000222682 803 ntBASIC12.7□□□□□ -0.38
TgfaP48030 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
TgfaP48030 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TgfaP48030 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TgfaP48030 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TgfaP48030 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms