Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.92□□□□□ -0.02
Vps4bP46467 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.92□□□□□ -0.02
Vps4bP46467 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.92□□□□□ -0.02
Vps4bP46467 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.92□□□□□ -0.02
Vps4bP46467 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.92□□□□□ -0.02
Vps4bP46467 Mir5131-201ENSMUST00000175426 93 ntBASIC14.92□□□□□ -0.02
Vps4bP46467 Gm4899-201ENSMUST00000178708 719 ntBASIC14.92□□□□□ -0.02
Vps4bP46467 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.92□□□□□ -0.02
Vps4bP46467 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
Vps4bP46467 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Vps4bP46467 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Vps4bP46467 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.92□□□□□ -0.02
Vps4bP46467 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.92□□□□□ -0.02
Vps4bP46467 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vps4bP46467 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Vps4bP46467 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.92□□□□□ -0.02
Vps4bP46467 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Vps4bP46467 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Vps4bP46467 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.91□□□□□ -0.02
Vps4bP46467 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.91□□□□□ -0.02
Vps4bP46467 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.91□□□□□ -0.02
Vps4bP46467 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.91□□□□□ -0.02
Vps4bP46467 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.91□□□□□ -0.02
Vps4bP46467 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Vps4bP46467 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Vps4bP46467 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps4bP46467 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Vps4bP46467 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.9□□□□□ -0.02
Vps4bP46467 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps4bP46467 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps4bP46467 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps4bP46467 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps4bP46467 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps4bP46467 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps4bP46467 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
Vps4bP46467 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.9□□□□□ -0.02
Vps4bP46467 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.9□□□□□ -0.02
Vps4bP46467 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.9□□□□□ -0.02
Vps4bP46467 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps4bP46467 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps4bP46467 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps4bP46467 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.9□□□□□ -0.02
Vps4bP46467 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps4bP46467 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Vps4bP46467 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.9□□□□□ -0.02
Vps4bP46467 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps4bP46467 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps4bP46467 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps4bP46467 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps4bP46467 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps4bP46467 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.9□□□□□ -0.02
Vps4bP46467 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps4bP46467 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.9□□□□□ -0.02
Vps4bP46467 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps4bP46467 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps4bP46467 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps4bP46467 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Vps4bP46467 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Vps4bP46467 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps4bP46467 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.89□□□□□ -0.03
Vps4bP46467 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps4bP46467 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.89□□□□□ -0.03
Vps4bP46467 Gm6736-201ENSMUST00000166583 948 ntBASIC14.89□□□□□ -0.03
Vps4bP46467 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.89□□□□□ -0.03
Vps4bP46467 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.89□□□□□ -0.03
Vps4bP46467 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.89□□□□□ -0.03
Vps4bP46467 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms