Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.07
Rfc1P35601 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfc1P35601 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc1P35601 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rfc1P35601 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc1P35601 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.51■□□□□ 0.07
Rfc1P35601 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Rfc1P35601 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc1P35601 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Rfc1P35601 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc1P35601 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc1P35601 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.51■□□□□ 0.07
Rfc1P35601 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc1P35601 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc1P35601 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.51■□□□□ 0.07
Rfc1P35601 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc1P35601 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Rfc1P35601 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.51■□□□□ 0.07
Rfc1P35601 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc1P35601 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.51■□□□□ 0.07
Rfc1P35601 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.51■□□□□ 0.07
Rfc1P35601 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc1P35601 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc1P35601 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc1P35601 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc1P35601 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rfc1P35601 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc1P35601 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc1P35601 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc1P35601 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc1P35601 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc1P35601 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rfc1P35601 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Rfc1P35601 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.5■□□□□ 0.07
Rfc1P35601 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
Rfc1P35601 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rfc1P35601 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.5■□□□□ 0.07
Rfc1P35601 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.5■□□□□ 0.07
Rfc1P35601 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.5■□□□□ 0.07
Rfc1P35601 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.5■□□□□ 0.07
Rfc1P35601 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.5■□□□□ 0.07
Rfc1P35601 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.5■□□□□ 0.07
Rfc1P35601 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.5■□□□□ 0.07
Rfc1P35601 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.5■□□□□ 0.07
Rfc1P35601 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.5■□□□□ 0.07
Rfc1P35601 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.5■□□□□ 0.07
Rfc1P35601 Gm8825-201ENSMUST00000182565 998 ntBASIC15.5■□□□□ 0.07
Rfc1P35601 Gm4518-201ENSMUST00000182638 718 ntBASIC15.5■□□□□ 0.07
Rfc1P35601 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.5■□□□□ 0.07
Rfc1P35601 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.5■□□□□ 0.07
Rfc1P35601 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.5■□□□□ 0.07
Rfc1P35601 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.5■□□□□ 0.07
Rfc1P35601 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Rfc1P35601 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.5■□□□□ 0.07
Rfc1P35601 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.5■□□□□ 0.07
Rfc1P35601 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.5■□□□□ 0.07
Rfc1P35601 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc1P35601 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc1P35601 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Rfc1P35601 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc1P35601 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc1P35601 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc1P35601 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc1P35601 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Rfc1P35601 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Rfc1P35601 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc1P35601 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc1P35601 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Rfc1P35601 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc1P35601 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc1P35601 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.49■□□□□ 0.07
Rfc1P35601 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc1P35601 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.49■□□□□ 0.07
Rfc1P35601 Mir3081-201ENSMUST00000175305 84 ntBASIC15.49■□□□□ 0.07
Rfc1P35601 Gm27704-201ENSMUST00000185094 107 ntBASIC15.49■□□□□ 0.07
Rfc1P35601 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.49■□□□□ 0.07
Rfc1P35601 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc1P35601 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc1P35601 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc1P35601 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.49■□□□□ 0.07
Rfc1P35601 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc1P35601 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms