Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm43170-201ENSMUST00000199827 612 ntBASIC16.83■□□□□ 0.28
Vcam1P29533 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.83■□□□□ 0.28
Vcam1P29533 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcam1P29533 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.83■□□□□ 0.28
Vcam1P29533 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcam1P29533 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.83■□□□□ 0.28
Vcam1P29533 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Vcam1P29533 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.83■□□□□ 0.28
Vcam1P29533 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcam1P29533 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcam1P29533 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcam1P29533 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Vcam1P29533 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcam1P29533 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcam1P29533 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vcam1P29533 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Vcam1P29533 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Vcam1P29533 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vcam1P29533 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vcam1P29533 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcam1P29533 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcam1P29533 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.82■□□□□ 0.28
Vcam1P29533 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vcam1P29533 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcam1P29533 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vcam1P29533 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Vcam1P29533 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Vcam1P29533 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.82■□□□□ 0.28
Vcam1P29533 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Vcam1P29533 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.82■□□□□ 0.28
Vcam1P29533 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Vcam1P29533 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vcam1P29533 Gm21854-201ENSMUST00000179901 471 ntBASIC16.82■□□□□ 0.28
Vcam1P29533 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.82■□□□□ 0.28
Vcam1P29533 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.82■□□□□ 0.28
Vcam1P29533 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vcam1P29533 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vcam1P29533 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vcam1P29533 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Vcam1P29533 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcam1P29533 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcam1P29533 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcam1P29533 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcam1P29533 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcam1P29533 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vcam1P29533 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vcam1P29533 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vcam1P29533 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.81■□□□□ 0.28
Vcam1P29533 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vcam1P29533 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vcam1P29533 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.81■□□□□ 0.28
Vcam1P29533 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vcam1P29533 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Vcam1P29533 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.81■□□□□ 0.28
Vcam1P29533 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.81■□□□□ 0.28
Vcam1P29533 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.81■□□□□ 0.28
Vcam1P29533 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Vcam1P29533 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vcam1P29533 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vcam1P29533 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vcam1P29533 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vcam1P29533 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vcam1P29533 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vcam1P29533 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vcam1P29533 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vcam1P29533 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Vcam1P29533 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vcam1P29533 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.8■□□□□ 0.28
Vcam1P29533 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Vcam1P29533 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.8■□□□□ 0.28
Vcam1P29533 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Vcam1P29533 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.8■□□□□ 0.28
Vcam1P29533 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.8■□□□□ 0.28
Vcam1P29533 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vcam1P29533 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vcam1P29533 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vcam1P29533 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vcam1P29533 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vcam1P29533 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vcam1P29533 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Vcam1P29533 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vcam1P29533 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms