Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.47□□□□□ -0.57
Ccl6P27784 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.47□□□□□ -0.57
Ccl6P27784 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.47□□□□□ -0.57
Ccl6P27784 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.47□□□□□ -0.57
Ccl6P27784 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.47□□□□□ -0.57
Ccl6P27784 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.47□□□□□ -0.57
Ccl6P27784 Gm43767-201ENSMUST00000198933 381 ntBASIC11.47□□□□□ -0.57
Ccl6P27784 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.47□□□□□ -0.57
Ccl6P27784 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.47□□□□□ -0.57
Ccl6P27784 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Ccl6P27784 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.47□□□□□ -0.57
Ccl6P27784 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ccl6P27784 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccl6P27784 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Ccl6P27784 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl6P27784 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ccl6P27784 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccl6P27784 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccl6P27784 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Ccl6P27784 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ccl6P27784 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.46□□□□□ -0.57
Ccl6P27784 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.46□□□□□ -0.57
Ccl6P27784 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.46□□□□□ -0.57
Ccl6P27784 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccl6P27784 Gm13597-201ENSMUST00000121239 375 ntBASIC11.46□□□□□ -0.57
Ccl6P27784 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ccl6P27784 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.46□□□□□ -0.57
Ccl6P27784 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ccl6P27784 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccl6P27784 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl6P27784 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl6P27784 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Ccl6P27784 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Ccl6P27784 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl6P27784 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Ccl6P27784 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl6P27784 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl6P27784 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccl6P27784 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Ccl6P27784 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Ccl6P27784 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ccl6P27784 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl6P27784 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl6P27784 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Ccl6P27784 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl6P27784 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl6P27784 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl6P27784 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
Ccl6P27784 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl6P27784 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl6P27784 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl6P27784 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl6P27784 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl6P27784 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl6P27784 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl6P27784 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl6P27784 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl6P27784 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl6P27784 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl6P27784 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl6P27784 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccl6P27784 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Ccl6P27784 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.45□□□□□ -0.58
Ccl6P27784 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms