Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Cd40lgP27548 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd40lgP27548 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd40lgP27548 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Cd40lgP27548 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.57□□□□□ -0.24
Cd40lgP27548 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cd40lgP27548 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.57□□□□□ -0.24
Cd40lgP27548 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.57□□□□□ -0.24
Cd40lgP27548 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Gm24513-201ENSMUST00000174964 138 ntBASIC13.57□□□□□ -0.24
Cd40lgP27548 Gm27301-201ENSMUST00000184012 127 ntBASIC13.57□□□□□ -0.24
Cd40lgP27548 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.57□□□□□ -0.24
Cd40lgP27548 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
Cd40lgP27548 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Cd40lgP27548 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.57□□□□□ -0.24
Cd40lgP27548 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cd40lgP27548 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40lgP27548 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40lgP27548 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40lgP27548 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40lgP27548 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40lgP27548 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cd40lgP27548 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40lgP27548 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40lgP27548 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cd40lgP27548 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40lgP27548 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40lgP27548 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cd40lgP27548 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40lgP27548 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40lgP27548 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.56□□□□□ -0.24
Cd40lgP27548 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.56□□□□□ -0.24
Cd40lgP27548 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.56□□□□□ -0.24
Cd40lgP27548 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.56□□□□□ -0.24
Cd40lgP27548 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.56□□□□□ -0.24
Cd40lgP27548 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40lgP27548 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.56□□□□□ -0.24
Cd40lgP27548 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40lgP27548 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40lgP27548 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.56□□□□□ -0.24
Cd40lgP27548 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cd40lgP27548 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40lgP27548 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40lgP27548 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40lgP27548 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40lgP27548 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40lgP27548 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cd40lgP27548 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.56□□□□□ -0.24
Cd40lgP27548 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cd40lgP27548 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40lgP27548 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40lgP27548 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40lgP27548 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40lgP27548 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40lgP27548 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40lgP27548 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40lgP27548 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40lgP27548 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cd40lgP27548 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Cd40lgP27548 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.55□□□□□ -0.24
Cd40lgP27548 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cd40lgP27548 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40lgP27548 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40lgP27548 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40lgP27548 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40lgP27548 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40lgP27548 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40lgP27548 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cd40lgP27548 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40lgP27548 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40lgP27548 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cd40lgP27548 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cd40lgP27548 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40lgP27548 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40lgP27548 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Cd40lgP27548 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms