Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.33□□□□□ -0.44
Tnfrsf1aP25118 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfrsf1aP25118 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfrsf1aP25118 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfrsf1aP25118 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfrsf1aP25118 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfrsf1aP25118 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfrsf1aP25118 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Gm44771-201ENSMUST00000206975 626 ntBASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfrsf1aP25118 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Gm13036-201ENSMUST00000117799 748 ntBASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Gm12134-201ENSMUST00000122109 520 ntBASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Gm15590-201ENSMUST00000078419 552 ntBASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf1aP25118 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.3□□□□□ -0.44
Tnfrsf1aP25118 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1aP25118 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf1aP25118 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1aP25118 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1aP25118 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1aP25118 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1aP25118 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1aP25118 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1aP25118 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1aP25118 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1aP25118 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf1aP25118 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf1aP25118 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf1aP25118 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms