Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TnfP06804 Gm27306-201ENSMUST00000183970 107 ntBASIC15.57■□□□□ 0.08
TnfP06804 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TnfP06804 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.57■□□□□ 0.08
TnfP06804 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TnfP06804 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.57■□□□□ 0.08
TnfP06804 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TnfP06804 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TnfP06804 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TnfP06804 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TnfP06804 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TnfP06804 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TnfP06804 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.57■□□□□ 0.08
TnfP06804 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TnfP06804 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TnfP06804 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TnfP06804 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TnfP06804 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
TnfP06804 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.56■□□□□ 0.08
TnfP06804 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.56■□□□□ 0.08
TnfP06804 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.56■□□□□ 0.08
TnfP06804 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TnfP06804 Gm27533-201ENSMUST00000183800 152 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm27989-201ENSMUST00000184721 107 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm29310-201ENSMUST00000185468 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm21825-201ENSMUST00000185728 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm29109-201ENSMUST00000185895 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm21896-201ENSMUST00000186520 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm21873-201ENSMUST00000186728 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm21794-201ENSMUST00000187056 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm21880-201ENSMUST00000187275 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm21826-201ENSMUST00000187451 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm21198-201ENSMUST00000188393 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm21749-201ENSMUST00000189343 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm21901-201ENSMUST00000189568 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm29424-201ENSMUST00000189716 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm28599-201ENSMUST00000189838 694 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm21867-201ENSMUST00000189917 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm29269-201ENSMUST00000190087 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm21722-201ENSMUST00000190153 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm28423-201ENSMUST00000190701 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm21899-201ENSMUST00000190745 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm21910-201ENSMUST00000191163 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm21849-201ENSMUST00000191571 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm28678-201ENSMUST00000191593 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm20910-201ENSMUST00000193268 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm21871-201ENSMUST00000194621 696 ntBASIC15.56■□□□□ 0.08
TnfP06804 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TnfP06804 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TnfP06804 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TnfP06804 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TnfP06804 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TnfP06804 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TnfP06804 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TnfP06804 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TnfP06804 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TnfP06804 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TnfP06804 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
TnfP06804 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.55■□□□□ 0.08
TnfP06804 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TnfP06804 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TnfP06804 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.55■□□□□ 0.08
TnfP06804 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TnfP06804 Gm24543-201ENSMUST00000103867 82 ntBASIC15.55■□□□□ 0.08
TnfP06804 Gm12151-201ENSMUST00000121374 290 ntBASIC15.55■□□□□ 0.08
TnfP06804 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TnfP06804 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TnfP06804 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TnfP06804 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.55■□□□□ 0.08
TnfP06804 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TnfP06804 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms