Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxa3P02831 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.33□□□□□ -0.44
Hoxa3P02831 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.33□□□□□ -0.44
Hoxa3P02831 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxa3P02831 Gm18057-201ENSMUST00000208220 503 ntBASIC12.33□□□□□ -0.44
Hoxa3P02831 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxa3P02831 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Hoxa3P02831 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa3P02831 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa3P02831 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hoxa3P02831 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
Hoxa3P02831 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa3P02831 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hoxa3P02831 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa3P02831 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa3P02831 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa3P02831 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Hoxa3P02831 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxa3P02831 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa3P02831 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hoxa3P02831 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa3P02831 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hoxa3P02831 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.33□□□□□ -0.44
Hoxa3P02831 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxa3P02831 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hoxa3P02831 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hoxa3P02831 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Hoxa3P02831 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.32□□□□□ -0.44
Hoxa3P02831 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.32□□□□□ -0.44
Hoxa3P02831 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hoxa3P02831 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.32□□□□□ -0.44
Hoxa3P02831 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.32□□□□□ -0.44
Hoxa3P02831 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxa3P02831 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
Hoxa3P02831 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.32□□□□□ -0.44
Hoxa3P02831 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa3P02831 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hoxa3P02831 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxa3P02831 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxa3P02831 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 Gm16026-204ENSMUST00000162652 683 ntBASIC12.31□□□□□ -0.44
Hoxa3P02831 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.31□□□□□ -0.44
Hoxa3P02831 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.31□□□□□ -0.44
Hoxa3P02831 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.31□□□□□ -0.44
Hoxa3P02831 Gm10576-201ENSMUST00000191927 825 ntBASIC12.31□□□□□ -0.44
Hoxa3P02831 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.31□□□□□ -0.44
Hoxa3P02831 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxa3P02831 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.31□□□□□ -0.44
Hoxa3P02831 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.31□□□□□ -0.44
Hoxa3P02831 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hoxa3P02831 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Hoxa3P02831 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa3P02831 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms