Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Best1O88870 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Best1O88870 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Best1O88870 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Gm38294-201ENSMUST00000192831 381 ntBASIC14.1□□□□□ -0.15
Best1O88870 AA619741-201ENSMUST00000195095 646 ntBASIC14.1□□□□□ -0.15
Best1O88870 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Gm45453-201ENSMUST00000211758 853 ntBASIC14.1□□□□□ -0.15
Best1O88870 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.1□□□□□ -0.15
Best1O88870 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.1□□□□□ -0.15
Best1O88870 Gm16476-201ENSMUST00000221544 139 ntBASIC14.1□□□□□ -0.15
Best1O88870 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Best1O88870 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Best1O88870 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Best1O88870 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Best1O88870 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Best1O88870 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Best1O88870 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Best1O88870 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Best1O88870 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Best1O88870 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Best1O88870 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Best1O88870 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Best1O88870 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.09□□□□□ -0.15
Best1O88870 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.09□□□□□ -0.15
Best1O88870 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Best1O88870 Mir8102-201ENSMUST00000184148 139 ntBASIC14.09□□□□□ -0.15
Best1O88870 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.09□□□□□ -0.15
Best1O88870 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Best1O88870 Gm44344-201ENSMUST00000200287 129 ntBASIC14.09□□□□□ -0.15
Best1O88870 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Best1O88870 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.09□□□□□ -0.15
Best1O88870 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Best1O88870 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
Best1O88870 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Best1O88870 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.09□□□□□ -0.15
Best1O88870 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Best1O88870 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Best1O88870 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Best1O88870 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Best1O88870 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Best1O88870 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Best1O88870 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Best1O88870 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Best1O88870 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Best1O88870 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.08□□□□□ -0.15
Best1O88870 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 Gm14057-201ENSMUST00000120631 482 ntBASIC14.08□□□□□ -0.16
Best1O88870 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.08□□□□□ -0.16
Best1O88870 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 Mir7684-201ENSMUST00000183858 60 ntBASIC14.08□□□□□ -0.16
Best1O88870 Gm27321-201ENSMUST00000185021 205 ntBASIC14.08□□□□□ -0.16
Best1O88870 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Best1O88870 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 Gm9063-201ENSMUST00000223299 582 ntBASIC14.08□□□□□ -0.16
Best1O88870 Shd-206ENSMUST00000225145 998 ntBASIC14.08□□□□□ -0.16
Best1O88870 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Best1O88870 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Best1O88870 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Best1O88870 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Best1O88870 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Best1O88870 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Best1O88870 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Best1O88870 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Best1O88870 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Best1O88870 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Best1O88870 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Best1O88870 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Best1O88870 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Best1O88870 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Best1O88870 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Best1O88870 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms