Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.92■□□□□ 0.3
Sema3fO88632 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sema3fO88632 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sema3fO88632 Shd-206ENSMUST00000225145 998 ntBASIC16.92■□□□□ 0.3
Sema3fO88632 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Sema3fO88632 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sema3fO88632 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sema3fO88632 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sema3fO88632 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Sema3fO88632 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sema3fO88632 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sema3fO88632 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sema3fO88632 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sema3fO88632 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.91■□□□□ 0.3
Sema3fO88632 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Gm14767-201ENSMUST00000121559 586 ntBASIC16.91■□□□□ 0.3
Sema3fO88632 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.91■□□□□ 0.3
Sema3fO88632 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.91■□□□□ 0.3
Sema3fO88632 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Gm44344-201ENSMUST00000200287 129 ntBASIC16.91■□□□□ 0.3
Sema3fO88632 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Gm2423-201ENSMUST00000074863 733 ntBASIC16.91■□□□□ 0.3
Sema3fO88632 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Sema3fO88632 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sema3fO88632 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3fO88632 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sema3fO88632 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3fO88632 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.9■□□□□ 0.3
Sema3fO88632 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3fO88632 Gm24543-201ENSMUST00000103867 82 ntBASIC16.9■□□□□ 0.3
Sema3fO88632 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Sema3fO88632 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.9■□□□□ 0.3
Sema3fO88632 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.9■□□□□ 0.3
Sema3fO88632 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3fO88632 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.9■□□□□ 0.3
Sema3fO88632 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.9■□□□□ 0.3
Sema3fO88632 Mir8102-201ENSMUST00000184148 139 ntBASIC16.9■□□□□ 0.3
Sema3fO88632 Mir6977-201ENSMUST00000184960 64 ntBASIC16.9■□□□□ 0.3
Sema3fO88632 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Sema3fO88632 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3fO88632 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3fO88632 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3fO88632 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sema3fO88632 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sema3fO88632 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.9■□□□□ 0.3
Sema3fO88632 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3fO88632 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3fO88632 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Sema3fO88632 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3fO88632 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3fO88632 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.9■□□□□ 0.3
Sema3fO88632 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3fO88632 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3fO88632 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sema3fO88632 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sema3fO88632 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sema3fO88632 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sema3fO88632 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3fO88632 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3fO88632 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.89■□□□□ 0.29
Sema3fO88632 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3fO88632 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3fO88632 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3fO88632 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3fO88632 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.89■□□□□ 0.29
Sema3fO88632 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3fO88632 Mir7684-201ENSMUST00000183858 60 ntBASIC16.89■□□□□ 0.29
Sema3fO88632 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3fO88632 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3fO88632 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3fO88632 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3fO88632 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3fO88632 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.89■□□□□ 0.29
Sema3fO88632 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Sema3fO88632 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3fO88632 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3fO88632 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sema3fO88632 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.89■□□□□ 0.29
Sema3fO88632 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sema3fO88632 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms