Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cops6O88545 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cops6O88545 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cops6O88545 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cops6O88545 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.89■□□□□ 0.45
Cops6O88545 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cops6O88545 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.88■□□□□ 0.45
Cops6O88545 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 Mir125a-201ENSMUST00000083545 68 ntBASIC17.88■□□□□ 0.45
Cops6O88545 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.88■□□□□ 0.45
Cops6O88545 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
Cops6O88545 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cops6O88545 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cops6O88545 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cops6O88545 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cops6O88545 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cops6O88545 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cops6O88545 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Cops6O88545 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cops6O88545 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cops6O88545 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cops6O88545 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cops6O88545 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cops6O88545 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cops6O88545 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cops6O88545 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cops6O88545 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cops6O88545 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.87■□□□□ 0.45
Cops6O88545 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.87■□□□□ 0.45
Cops6O88545 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.87■□□□□ 0.45
Cops6O88545 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.87■□□□□ 0.45
Cops6O88545 Gm9229-201ENSMUST00000222777 126 ntBASIC17.87■□□□□ 0.45
Cops6O88545 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cops6O88545 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cops6O88545 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.87■□□□□ 0.45
Cops6O88545 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cops6O88545 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cops6O88545 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.87■□□□□ 0.45
Cops6O88545 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
Cops6O88545 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cops6O88545 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cops6O88545 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.86■□□□□ 0.45
Cops6O88545 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Cops6O88545 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops6O88545 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops6O88545 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Cops6O88545 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cops6O88545 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Cops6O88545 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cops6O88545 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.86■□□□□ 0.45
Cops6O88545 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.86■□□□□ 0.45
Cops6O88545 Gm20445-201ENSMUST00000061905 565 ntBASIC17.86■□□□□ 0.45
Cops6O88545 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC17.86■□□□□ 0.45
Cops6O88545 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC17.86■□□□□ 0.45
Cops6O88545 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Cops6O88545 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops6O88545 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops6O88545 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops6O88545 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.86■□□□□ 0.45
Cops6O88545 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops6O88545 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops6O88545 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops6O88545 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops6O88545 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cops6O88545 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Cops6O88545 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Cops6O88545 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops6O88545 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cops6O88545 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cops6O88545 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cops6O88545 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cops6O88545 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Cops6O88545 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cops6O88545 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cops6O88545 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cops6O88545 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.85■□□□□ 0.45
Cops6O88545 Gm12859-201ENSMUST00000117834 427 ntBASIC17.85■□□□□ 0.45
Cops6O88545 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cops6O88545 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.85■□□□□ 0.45
Cops6O88545 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cops6O88545 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms