Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.8■□□□□ 0.12
Nr1i3O35627 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.8■□□□□ 0.12
Nr1i3O35627 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.8■□□□□ 0.12
Nr1i3O35627 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.8■□□□□ 0.12
Nr1i3O35627 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.8■□□□□ 0.12
Nr1i3O35627 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Nr1i3O35627 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Nr1i3O35627 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Nr1i3O35627 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.8■□□□□ 0.12
Nr1i3O35627 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.8■□□□□ 0.12
Nr1i3O35627 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1i3O35627 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1i3O35627 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1i3O35627 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1i3O35627 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1i3O35627 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1i3O35627 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1i3O35627 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1i3O35627 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1i3O35627 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.79■□□□□ 0.12
Nr1i3O35627 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.79■□□□□ 0.12
Nr1i3O35627 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.79■□□□□ 0.12
Nr1i3O35627 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.79■□□□□ 0.12
Nr1i3O35627 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.79■□□□□ 0.12
Nr1i3O35627 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1i3O35627 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.79■□□□□ 0.12
Nr1i3O35627 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1i3O35627 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1i3O35627 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1i3O35627 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1i3O35627 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Nr1i3O35627 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nr1i3O35627 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Nr1i3O35627 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Nr1i3O35627 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Nr1i3O35627 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Nr1i3O35627 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Gm13597-201ENSMUST00000121239 375 ntBASIC15.78■□□□□ 0.12
Nr1i3O35627 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.78■□□□□ 0.12
Nr1i3O35627 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Gm10819-201ENSMUST00000099988 561 ntBASIC15.78■□□□□ 0.12
Nr1i3O35627 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.78■□□□□ 0.12
Nr1i3O35627 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Nr1i3O35627 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.78■□□□□ 0.12
Nr1i3O35627 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Nr1i3O35627 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Nr1i3O35627 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.78■□□□□ 0.12
Nr1i3O35627 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nr1i3O35627 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Nr1i3O35627 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.77■□□□□ 0.12
Nr1i3O35627 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nr1i3O35627 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nr1i3O35627 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nr1i3O35627 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nr1i3O35627 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nr1i3O35627 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nr1i3O35627 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Nr1i3O35627 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nr1i3O35627 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nr1i3O35627 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nr1i3O35627 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nr1i3O35627 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.77■□□□□ 0.12
Nr1i3O35627 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.77■□□□□ 0.12
Nr1i3O35627 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Nr1i3O35627 Mir5131-201ENSMUST00000175426 93 ntBASIC15.77■□□□□ 0.12
Nr1i3O35627 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.77■□□□□ 0.12
Nr1i3O35627 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nr1i3O35627 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nr1i3O35627 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.77■□□□□ 0.12
Nr1i3O35627 Gm10154-201ENSMUST00000084445 354 ntBASIC15.77■□□□□ 0.12
Nr1i3O35627 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms