Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.63□□□□□ -0.23
Capn1O35350 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.63□□□□□ -0.23
Capn1O35350 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Capn1O35350 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.63□□□□□ -0.23
Capn1O35350 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Capn1O35350 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.63□□□□□ -0.23
Capn1O35350 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Capn1O35350 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.63□□□□□ -0.23
Capn1O35350 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Capn1O35350 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Capn1O35350 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Capn1O35350 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.62□□□□□ -0.23
Capn1O35350 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.62□□□□□ -0.23
Capn1O35350 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Gm43474-201ENSMUST00000196415 774 ntBASIC13.62□□□□□ -0.23
Capn1O35350 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.62□□□□□ -0.23
Capn1O35350 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Capn1O35350 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Capn1O35350 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Capn1O35350 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.62□□□□□ -0.23
Capn1O35350 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.62□□□□□ -0.23
Capn1O35350 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Capn1O35350 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Capn1O35350 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Capn1O35350 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Capn1O35350 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.61□□□□□ -0.23
Capn1O35350 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Capn1O35350 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Capn1O35350 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Capn1O35350 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Capn1O35350 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Capn1O35350 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Capn1O35350 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Capn1O35350 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.61□□□□□ -0.23
Capn1O35350 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.61□□□□□ -0.23
Capn1O35350 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Capn1O35350 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Capn1O35350 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.61□□□□□ -0.23
Capn1O35350 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Capn1O35350 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Capn1O35350 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.61□□□□□ -0.23
Capn1O35350 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Capn1O35350 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Capn1O35350 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Capn1O35350 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Capn1O35350 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Capn1O35350 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Capn1O35350 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.61□□□□□ -0.23
Capn1O35350 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Capn1O35350 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Capn1O35350 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Capn1O35350 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Capn1O35350 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Capn1O35350 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Capn1O35350 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Capn1O35350 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Capn1O35350 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Capn1O35350 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.6□□□□□ -0.23
Capn1O35350 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.6□□□□□ -0.23
Capn1O35350 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms