Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Gm11950-201ENSMUST00000121615 838 ntBASIC11.48□□□□□ -0.57
Tnfsf11O35235 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Gm45328-201ENSMUST00000210942 917 ntBASIC11.48□□□□□ -0.57
Tnfsf11O35235 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.47□□□□□ -0.57
Tnfsf11O35235 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.47□□□□□ -0.57
Tnfsf11O35235 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Gm10231-201ENSMUST00000181584 441 ntBASIC11.47□□□□□ -0.57
Tnfsf11O35235 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Gm10175-202ENSMUST00000208752 441 ntBASIC11.47□□□□□ -0.57
Tnfsf11O35235 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Tnfsf11O35235 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.46□□□□□ -0.57
Tnfsf11O35235 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.46□□□□□ -0.57
Tnfsf11O35235 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Gm8318-201ENSMUST00000182954 872 ntBASIC11.46□□□□□ -0.57
Tnfsf11O35235 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Tnfsf11O35235 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Gm18622-201ENSMUST00000219361 595 ntBASIC11.46□□□□□ -0.57
Tnfsf11O35235 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tnfsf11O35235 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms