Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.81□□□□□ -0.2
Cx3cl1O35188 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.81□□□□□ -0.2
Cx3cl1O35188 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.81□□□□□ -0.2
Cx3cl1O35188 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cl1O35188 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.8□□□□□ -0.2
Cx3cl1O35188 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.8□□□□□ -0.2
Cx3cl1O35188 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.8□□□□□ -0.2
Cx3cl1O35188 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Efs-202ENSMUST00000227037 2540 ntBASIC13.8□□□□□ -0.2
Cx3cl1O35188 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cl1O35188 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Cx3cl1O35188 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Mir1895-201ENSMUST00000122615 79 ntBASIC13.79□□□□□ -0.2
Cx3cl1O35188 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cl1O35188 Gm27494-201ENSMUST00000184735 189 ntBASIC13.79□□□□□ -0.2
Cx3cl1O35188 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms