Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Ndufb11O09111 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.77□□□□□ -0.52
Ndufb11O09111 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ndufb11O09111 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Ndufb11O09111 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ndufb11O09111 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndufb11O09111 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndufb11O09111 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.77□□□□□ -0.53
Ndufb11O09111 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC11.77□□□□□ -0.53
Ndufb11O09111 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.77□□□□□ -0.53
Ndufb11O09111 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.77□□□□□ -0.53
Ndufb11O09111 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC11.77□□□□□ -0.53
Ndufb11O09111 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndufb11O09111 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndufb11O09111 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndufb11O09111 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndufb11O09111 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ndufb11O09111 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ndufb11O09111 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndufb11O09111 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndufb11O09111 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ndufb11O09111 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.76□□□□□ -0.53
Ndufb11O09111 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.76□□□□□ -0.53
Ndufb11O09111 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ndufb11O09111 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC11.76□□□□□ -0.53
Ndufb11O09111 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC11.76□□□□□ -0.53
Ndufb11O09111 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ndufb11O09111 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.76□□□□□ -0.53
Ndufb11O09111 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ndufb11O09111 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ndufb11O09111 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ndufb11O09111 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Ndufb11O09111 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.75□□□□□ -0.53
Ndufb11O09111 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Gm12896-201ENSMUST00000118430 226 ntBASIC11.75□□□□□ -0.53
Ndufb11O09111 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Ndufb11O09111 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ndufb11O09111 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ndufb11O09111 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ndufb11O09111 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ndufb11O09111 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ndufb11O09111 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.75□□□□□ -0.53
Ndufb11O09111 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ndufb11O09111 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms