Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3727J3QM54 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.49□□□□□ -0.41
Gm3727J3QM54 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Gm11355-201ENSMUST00000121120 306 ntBASIC12.49□□□□□ -0.41
Gm3727J3QM54 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.49□□□□□ -0.41
Gm3727J3QM54 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.49□□□□□ -0.41
Gm3727J3QM54 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.49□□□□□ -0.41
Gm3727J3QM54 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.49□□□□□ -0.41
Gm3727J3QM54 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3727J3QM54 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.48□□□□□ -0.41
Gm3727J3QM54 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Gm13168-201ENSMUST00000121771 632 ntBASIC12.48□□□□□ -0.41
Gm3727J3QM54 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.48□□□□□ -0.41
Gm3727J3QM54 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.48□□□□□ -0.41
Gm3727J3QM54 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3727J3QM54 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3727J3QM54 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3727J3QM54 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3727J3QM54 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3727J3QM54 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3727J3QM54 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3727J3QM54 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3727J3QM54 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Gm3727J3QM54 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.47□□□□□ -0.41
Gm3727J3QM54 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Gm3727J3QM54 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3727J3QM54 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3727J3QM54 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3727J3QM54 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3727J3QM54 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.47□□□□□ -0.41
Gm3727J3QM54 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms