Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4aE9Q735 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.57■□□□□ 0.4
Ube4aE9Q735 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4aE9Q735 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Gm21854-201ENSMUST00000179901 471 ntBASIC17.57■□□□□ 0.4
Ube4aE9Q735 Gm6916-202ENSMUST00000205523 195 ntBASIC17.57■□□□□ 0.4
Ube4aE9Q735 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ube4aE9Q735 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4aE9Q735 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Gm42612-201ENSMUST00000197986 623 ntBASIC17.56■□□□□ 0.4
Ube4aE9Q735 Gm43170-201ENSMUST00000199827 612 ntBASIC17.56■□□□□ 0.4
Ube4aE9Q735 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4aE9Q735 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube4aE9Q735 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Gm14042-201ENSMUST00000120139 833 ntBASIC17.55■□□□□ 0.4
Ube4aE9Q735 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Gm9794-201ENSMUST00000202370 423 ntBASIC17.55■□□□□ 0.4
Ube4aE9Q735 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.55■□□□□ 0.4
Ube4aE9Q735 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube4aE9Q735 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms