Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb9E9Q5G2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb9E9Q5G2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb9E9Q5G2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb9E9Q5G2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb9E9Q5G2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb9E9Q5G2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Pcdhb9E9Q5G2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Pcdhb9E9Q5G2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb9E9Q5G2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb9E9Q5G2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb9E9Q5G2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb9E9Q5G2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Gm27430-201ENSMUST00000184585 107 ntBASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Gm44333-201ENSMUST00000197168 107 ntBASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Gm44872-201ENSMUST00000207864 420 ntBASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhb9E9Q5G2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb9E9Q5G2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm25925-201ENSMUST00000158314 306 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm29310-201ENSMUST00000185468 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm21825-201ENSMUST00000185728 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm29109-201ENSMUST00000185895 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm21896-201ENSMUST00000186520 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm21873-201ENSMUST00000186728 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm21794-201ENSMUST00000187056 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm21880-201ENSMUST00000187275 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm21826-201ENSMUST00000187451 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm28630-201ENSMUST00000187806 498 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm21198-201ENSMUST00000188393 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm21749-201ENSMUST00000189343 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm21901-201ENSMUST00000189568 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm29424-201ENSMUST00000189716 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm28599-201ENSMUST00000189838 694 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm21867-201ENSMUST00000189917 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm29269-201ENSMUST00000190087 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm21722-201ENSMUST00000190153 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm28423-201ENSMUST00000190701 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm21899-201ENSMUST00000190745 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm21910-201ENSMUST00000191163 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm21849-201ENSMUST00000191571 696 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms