Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Gm15483-201ENSMUST00000120338 456 ntBASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdh17E9PXF0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Gm15693-201ENSMUST00000120470 637 ntBASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdh17E9PXF0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Gm27622-201ENSMUST00000183779 60 ntBASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Gm38225-201ENSMUST00000194001 393 ntBASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdh17E9PXF0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms