Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Shank1D3YZU1 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.16□□□□□ -0.3
Shank1D3YZU1 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.16□□□□□ -0.3
Shank1D3YZU1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Shank1D3YZU1 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.15□□□□□ -0.3
Shank1D3YZU1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shank1D3YZU1 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.15□□□□□ -0.3
Shank1D3YZU1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shank1D3YZU1 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Mir1897-201ENSMUST00000122581 272 ntBASIC13.15□□□□□ -0.3
Shank1D3YZU1 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.15□□□□□ -0.3
Shank1D3YZU1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shank1D3YZU1 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.15□□□□□ -0.3
Shank1D3YZU1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shank1D3YZU1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Shank1D3YZU1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Shank1D3YZU1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.14□□□□□ -0.31
Shank1D3YZU1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.14□□□□□ -0.31
Shank1D3YZU1 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Gm17150-201ENSMUST00000165577 381 ntBASIC13.14□□□□□ -0.31
Shank1D3YZU1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Shank1D3YZU1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms