Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a6B1AVK5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col4a6B1AVK5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a6B1AVK5 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a6B1AVK5 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a6B1AVK5 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a6B1AVK5 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Gm37424-201ENSMUST00000191727 561 ntBASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Gm43094-201ENSMUST00000196549 921 ntBASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Gm18905-201ENSMUST00000205454 928 ntBASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Gm8598-201ENSMUST00000221184 836 ntBASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a6B1AVK5 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.86□□□□□ -0.03
Col4a6B1AVK5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a6B1AVK5 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a6B1AVK5 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Col4a6B1AVK5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a6B1AVK5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a6B1AVK5 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a6B1AVK5 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a6B1AVK5 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a6B1AVK5 Gm15429-201ENSMUST00000151268 798 ntBASIC14.86□□□□□ -0.03
Col4a6B1AVK5 Gm8652-201ENSMUST00000181363 964 ntBASIC14.86□□□□□ -0.03
Col4a6B1AVK5 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.86□□□□□ -0.03
Col4a6B1AVK5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a6B1AVK5 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a6B1AVK5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a6B1AVK5 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a6B1AVK5 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a6B1AVK5 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a6B1AVK5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Gm7287-201ENSMUST00000205267 602 ntBASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Gm10478-201ENSMUST00000084451 396 ntBASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a6B1AVK5 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms