Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Gm7153-201ENSMUST00000117092 455 ntBASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 AV026068-213ENSMUST00000223675 1171 ntBASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc112A0AUP1 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Gm8749-201ENSMUST00000117737 331 ntBASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc112A0AUP1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc112A0AUP1 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc112A0AUP1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms