Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Gm22189-201ENSMUST00000103822 86 ntBASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Gm14042-201ENSMUST00000120139 833 ntBASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav8n-2A0A075B633 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Gm6912-201ENSMUST00000117218 544 ntBASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Gm8749-201ENSMUST00000117737 331 ntBASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Gm37917-201ENSMUST00000194711 392 ntBASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav8n-2A0A075B633 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 App-207ENSMUST00000227737 2827 ntBASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 AA619741-201ENSMUST00000195095 646 ntBASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms