Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Gm12151-201ENSMUST00000121374 290 ntBASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn8aQ9WTU3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scn8aQ9WTU3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 Gm3436-201ENSMUST00000179930 840 ntBASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn8aQ9WTU3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scn8aQ9WTU3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scn8aQ9WTU3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scn8aQ9WTU3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Scn8aQ9WTU3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Scn8aQ9WTU3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Scn8aQ9WTU3 Gm9063-201ENSMUST00000223299 582 ntBASIC14.71□□□□□ -0.06
Scn8aQ9WTU3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Scn8aQ9WTU3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Gm22189-201ENSMUST00000103822 86 ntBASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn8aQ9WTU3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms