Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Gm25144-201ENSMUST00000179561 110 ntBASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Gm25352-201ENSMUST00000179815 110 ntBASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Gm38294-201ENSMUST00000192831 381 ntBASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ube3bQ9ES34 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ube3bQ9ES34 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Ube3bQ9ES34 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Carlr-201ENSMUST00000181515 2574 ntBASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ube3bQ9ES34 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ube3bQ9ES34 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube3bQ9ES34 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Gm10275-202ENSMUST00000168697 495 ntBASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Mir7023-201ENSMUST00000185093 64 ntBASIC17.44■□□□□ 0.38
Ube3bQ9ES34 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.44■□□□□ 0.38
Ube3bQ9ES34 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Gm10275-201ENSMUST00000092620 635 ntBASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ube3bQ9ES34 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube3bQ9ES34 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube3bQ9ES34 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.43■□□□□ 0.38
Ube3bQ9ES34 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube3bQ9ES34 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.43■□□□□ 0.38
Ube3bQ9ES34 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms