Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stag1Q9D3E6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Gm14719-201ENSMUST00000121891 340 ntBASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Stag1Q9D3E6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm29310-201ENSMUST00000185468 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm21825-201ENSMUST00000185728 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm29109-201ENSMUST00000185895 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm21896-201ENSMUST00000186520 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm21873-201ENSMUST00000186728 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm21794-201ENSMUST00000187056 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm21880-201ENSMUST00000187275 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm21826-201ENSMUST00000187451 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm21198-201ENSMUST00000188393 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm21749-201ENSMUST00000189343 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm21901-201ENSMUST00000189568 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm29424-201ENSMUST00000189716 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm28599-201ENSMUST00000189838 694 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm21867-201ENSMUST00000189917 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm29269-201ENSMUST00000190087 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm21722-201ENSMUST00000190153 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm28423-201ENSMUST00000190701 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm21899-201ENSMUST00000190745 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm21910-201ENSMUST00000191163 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm21849-201ENSMUST00000191571 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm28678-201ENSMUST00000191593 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm20910-201ENSMUST00000193268 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm21871-201ENSMUST00000194621 696 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Gm7730-201ENSMUST00000212486 454 ntBASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Stag1Q9D3E6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms