Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Gm6376-201ENSMUST00000209407 580 ntBASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Birc2-201ENSMUST00000054878 378 ntBASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nipsnap3bQ9CQE1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm24589-201ENSMUST00000116692 94 ntBASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm9103-201ENSMUST00000119371 405 ntBASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm7787-201ENSMUST00000216858 688 ntBASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.53□□□□□ -0.08
Nipsnap3bQ9CQE1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.52□□□□□ -0.08
Nipsnap3bQ9CQE1 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nipsnap3bQ9CQE1 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Nipsnap3bQ9CQE1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Nipsnap3bQ9CQE1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nipsnap3bQ9CQE1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nipsnap3bQ9CQE1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nipsnap3bQ9CQE1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nipsnap3bQ9CQE1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.52□□□□□ -0.09
Nipsnap3bQ9CQE1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nipsnap3bQ9CQE1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.52□□□□□ -0.09
Nipsnap3bQ9CQE1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nipsnap3bQ9CQE1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.52□□□□□ -0.09
Nipsnap3bQ9CQE1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nipsnap3bQ9CQE1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nipsnap3bQ9CQE1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nipsnap3bQ9CQE1 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nipsnap3bQ9CQE1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.52□□□□□ -0.09
Nipsnap3bQ9CQE1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nipsnap3bQ9CQE1 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Gm12008-201ENSMUST00000117791 755 ntBASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Gm45167-201ENSMUST00000208007 322 ntBASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.51□□□□□ -0.09
Nipsnap3bQ9CQE1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms