Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.25□□□□□ -0.13
Cstf3Q99LI7 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cstf3Q99LI7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cstf3Q99LI7 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.23□□□□□ -0.13
Cstf3Q99LI7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Mir5126-201ENSMUST00000175513 77 ntBASIC14.23□□□□□ -0.13
Cstf3Q99LI7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cstf3Q99LI7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms