Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Gm4899-201ENSMUST00000178708 719 ntBASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Gm27525-201ENSMUST00000184465 107 ntBASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.21□□□□□ -0.13
Vmp1Q99KU0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.21□□□□□ -0.13
Vmp1Q99KU0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Vmp1Q99KU0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vmp1Q99KU0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vmp1Q99KU0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Vmp1Q99KU0 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Vmp1Q99KU0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Vmp1Q99KU0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vmp1Q99KU0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Vmp1Q99KU0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Gm8318-201ENSMUST00000182954 872 ntBASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.2□□□□□ -0.14
Vmp1Q99KU0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Gm12260-201ENSMUST00000122447 411 ntBASIC14.19□□□□□ -0.14
Vmp1Q99KU0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms