Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Gm14822-201ENSMUST00000122247 291 ntBASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Pcdha9Q91Y11 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha9Q91Y11 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Gm2810-201ENSMUST00000118681 990 ntBASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Gm13365-201ENSMUST00000121188 973 ntBASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Gm6736-201ENSMUST00000166583 948 ntBASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdha9Q91Y11 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms