Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdhb20Q91XZ9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb20Q91XZ9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb20Q91XZ9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb20Q91XZ9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdhb20Q91XZ9 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.41□□□□□ -0.1
Pcdhb20Q91XZ9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb20Q91XZ9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdhb20Q91XZ9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Pcdhb20Q91XZ9 Clec12b-202ENSMUST00000112082 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb20Q91XZ9 AC151904.4-201ENSMUST00000219868 1319 ntBASIC14.41□□□□□ -0.1
Pcdhb20Q91XZ9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Gm23673-201ENSMUST00000157474 298 ntBASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Gm20659-201ENSMUST00000176599 604 ntTSL 3 BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Gm27494-201ENSMUST00000184735 189 ntBASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Gm42732-201ENSMUST00000202887 1197 ntBASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb20Q91XZ9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Gm18352-201ENSMUST00000189113 902 ntBASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Gm42696-201ENSMUST00000199859 1142 ntBASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb20Q91XZ9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Gm9385-201ENSMUST00000117563 472 ntBASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Gm16044-201ENSMUST00000118475 450 ntBASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Gm26308-201ENSMUST00000157768 69 ntBASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Rpph1-201ENSMUST00000175096 319 ntBASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Gm43767-201ENSMUST00000198933 381 ntBASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 Gm45399-201ENSMUST00000209955 1016 ntBASIC14.38□□□□□ -0.11
Pcdhb20Q91XZ9 AC152169.2-201ENSMUST00000224558 613 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms