Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
StrcQ8VIM6 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
StrcQ8VIM6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
StrcQ8VIM6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
StrcQ8VIM6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
StrcQ8VIM6 Gm37015-201ENSMUST00000192763 1521 ntBASIC17.2■□□□□ 0.34
StrcQ8VIM6 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
StrcQ8VIM6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Gm12203-201ENSMUST00000118235 598 ntBASIC17.19■□□□□ 0.34
StrcQ8VIM6 Gm12209-201ENSMUST00000120089 596 ntBASIC17.19■□□□□ 0.34
StrcQ8VIM6 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.19■□□□□ 0.34
StrcQ8VIM6 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC17.19■□□□□ 0.34
StrcQ8VIM6 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC17.19■□□□□ 0.34
StrcQ8VIM6 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
StrcQ8VIM6 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.19■□□□□ 0.34
StrcQ8VIM6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.19■□□□□ 0.34
StrcQ8VIM6 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.19■□□□□ 0.34
StrcQ8VIM6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.19■□□□□ 0.34
StrcQ8VIM6 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.19■□□□□ 0.34
StrcQ8VIM6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Gm29649-201ENSMUST00000185649 419 ntBASIC17.19■□□□□ 0.34
StrcQ8VIM6 Gm37259-201ENSMUST00000193903 849 ntBASIC17.19■□□□□ 0.34
StrcQ8VIM6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
StrcQ8VIM6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
StrcQ8VIM6 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.18■□□□□ 0.34
StrcQ8VIM6 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.18■□□□□ 0.34
StrcQ8VIM6 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.18■□□□□ 0.34
StrcQ8VIM6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.18■□□□□ 0.34
StrcQ8VIM6 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.18■□□□□ 0.34
StrcQ8VIM6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
StrcQ8VIM6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Gm4271-201ENSMUST00000174444 973 ntBASIC17.17■□□□□ 0.34
StrcQ8VIM6 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.17■□□□□ 0.34
StrcQ8VIM6 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.17■□□□□ 0.34
StrcQ8VIM6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.17■□□□□ 0.34
StrcQ8VIM6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Gm11793-201ENSMUST00000120433 981 ntBASIC17.17■□□□□ 0.34
StrcQ8VIM6 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Rn7s1-201ENSMUST00000174924 300 ntBASIC17.17■□□□□ 0.34
StrcQ8VIM6 Rn7s2-201ENSMUST00000175032 300 ntBASIC17.17■□□□□ 0.34
StrcQ8VIM6 Gm26461-201ENSMUST00000175064 290 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms