Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rfwd3Q8CIK8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfwd3Q8CIK8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Gm10154-201ENSMUST00000084445 354 ntBASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfwd3Q8CIK8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rfwd3Q8CIK8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Rfwd3Q8CIK8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Rfwd3Q8CIK8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rfwd3Q8CIK8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rfwd3Q8CIK8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Rfwd3Q8CIK8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rfwd3Q8CIK8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rfwd3Q8CIK8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Rfwd3Q8CIK8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rfwd3Q8CIK8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfwd3Q8CIK8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfwd3Q8CIK8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfwd3Q8CIK8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rfwd3Q8CIK8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfwd3Q8CIK8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.83□□□□□ -0.2
Rfwd3Q8CIK8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rfwd3Q8CIK8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rfwd3Q8CIK8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms