Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rbm28Q8CGC6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Mir7023-201ENSMUST00000185093 64 ntBASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rbm28Q8CGC6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Gm20949-201ENSMUST00000206478 952 ntBASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Gm5779-201ENSMUST00000218467 910 ntBASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.4■□□□□ 0.38
Rbm28Q8CGC6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rbm28Q8CGC6 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.39■□□□□ 0.38
Rbm28Q8CGC6 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.39■□□□□ 0.38
Rbm28Q8CGC6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Gm15483-201ENSMUST00000120338 456 ntBASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rbm28Q8CGC6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rbm28Q8CGC6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.38■□□□□ 0.37
Rbm28Q8CGC6 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Rbm28Q8CGC6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rbm28Q8CGC6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rbm28Q8CGC6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms