Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup88Q8CEC0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup88Q8CEC0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup88Q8CEC0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup88Q8CEC0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nup88Q8CEC0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nup88Q8CEC0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nup88Q8CEC0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup88Q8CEC0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Nup88Q8CEC0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Celf4-206ENSMUST00000224553 1729 ntBASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nup88Q8CEC0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Gm8396-201ENSMUST00000057361 823 ntBASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup88Q8CEC0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Auts2-212ENSMUST00000178555 309 ntBASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Nup88Q8CEC0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms