Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SynpoQ8CC35 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SynpoQ8CC35 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SynpoQ8CC35 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.27□□□□□ -0.13
SynpoQ8CC35 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SynpoQ8CC35 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.27□□□□□ -0.13
SynpoQ8CC35 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.27□□□□□ -0.13
SynpoQ8CC35 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.27□□□□□ -0.13
SynpoQ8CC35 Gm11025-201ENSMUST00000140773 466 ntBASIC14.27□□□□□ -0.13
SynpoQ8CC35 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.27□□□□□ -0.13
SynpoQ8CC35 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.27□□□□□ -0.13
SynpoQ8CC35 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SynpoQ8CC35 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.27□□□□□ -0.13
SynpoQ8CC35 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SynpoQ8CC35 Chchd1-203ENSMUST00000224633 557 ntBASIC14.27□□□□□ -0.13
SynpoQ8CC35 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SynpoQ8CC35 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SynpoQ8CC35 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
SynpoQ8CC35 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SynpoQ8CC35 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SynpoQ8CC35 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SynpoQ8CC35 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
SynpoQ8CC35 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SynpoQ8CC35 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.25□□□□□ -0.13
SynpoQ8CC35 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Gm13597-201ENSMUST00000121239 375 ntBASIC14.25□□□□□ -0.13
SynpoQ8CC35 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Gm27301-201ENSMUST00000184012 127 ntBASIC14.25□□□□□ -0.13
SynpoQ8CC35 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.25□□□□□ -0.13
SynpoQ8CC35 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.25□□□□□ -0.13
SynpoQ8CC35 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SynpoQ8CC35 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
SynpoQ8CC35 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.24□□□□□ -0.13
SynpoQ8CC35 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.24□□□□□ -0.13
SynpoQ8CC35 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynpoQ8CC35 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
SynpoQ8CC35 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms