Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp47Q8BY87 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC20.71■□□□□ 0.91
Usp47Q8BY87 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp47Q8BY87 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp47Q8BY87 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp47Q8BY87 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp47Q8BY87 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp47Q8BY87 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp47Q8BY87 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC20.71■□□□□ 0.91
Usp47Q8BY87 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp47Q8BY87 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Usp47Q8BY87 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Usp47Q8BY87 Gm14057-201ENSMUST00000120631 482 ntBASIC20.71■□□□□ 0.91
Usp47Q8BY87 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp47Q8BY87 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp47Q8BY87 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp47Q8BY87 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp47Q8BY87 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp47Q8BY87 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp47Q8BY87 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp47Q8BY87 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp47Q8BY87 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC20.7■□□□□ 0.9
Usp47Q8BY87 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
Usp47Q8BY87 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp47Q8BY87 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Usp47Q8BY87 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Usp47Q8BY87 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp47Q8BY87 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp47Q8BY87 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Usp47Q8BY87 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC20.7■□□□□ 0.9
Usp47Q8BY87 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp47Q8BY87 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Usp47Q8BY87 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp47Q8BY87 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Usp47Q8BY87 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC20.7■□□□□ 0.9
Usp47Q8BY87 Shd-206ENSMUST00000225145 998 ntBASIC20.7■□□□□ 0.9
Usp47Q8BY87 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp47Q8BY87 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp47Q8BY87 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Usp47Q8BY87 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp47Q8BY87 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp47Q8BY87 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Gm14767-201ENSMUST00000121559 586 ntBASIC20.69■□□□□ 0.9
Usp47Q8BY87 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Gm44344-201ENSMUST00000200287 129 ntBASIC20.69■□□□□ 0.9
Usp47Q8BY87 Gm7775-201ENSMUST00000218871 853 ntBASIC20.69■□□□□ 0.9
Usp47Q8BY87 Gm9063-201ENSMUST00000223299 582 ntBASIC20.69■□□□□ 0.9
Usp47Q8BY87 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp47Q8BY87 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp47Q8BY87 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp47Q8BY87 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp47Q8BY87 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp47Q8BY87 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Usp47Q8BY87 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Usp47Q8BY87 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp47Q8BY87 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms