Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trerf1Q8BXJ2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trerf1Q8BXJ2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trerf1Q8BXJ2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Trerf1Q8BXJ2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Gm7787-201ENSMUST00000216858 688 ntBASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Trerf1Q8BXJ2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Gm10499-201ENSMUST00000174094 934 ntBASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Gm8000-201ENSMUST00000188378 592 ntBASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trerf1Q8BXJ2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trerf1Q8BXJ2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trerf1Q8BXJ2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trerf1Q8BXJ2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trerf1Q8BXJ2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trerf1Q8BXJ2 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms