Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 Birc2-201ENSMUST00000054878 378 ntBASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cpsf7Q8BTV2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cpsf7Q8BTV2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Gm8097-201ENSMUST00000117903 829 ntBASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Gm15372-201ENSMUST00000120729 834 ntBASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Gm43347-201ENSMUST00000200226 580 ntBASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cpsf7Q8BTV2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Cpsf7Q8BTV2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf7Q8BTV2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf7Q8BTV2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf7Q8BTV2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf7Q8BTV2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf7Q8BTV2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf7Q8BTV2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cpsf7Q8BTV2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms