Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cpne3Q8BT60 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Gm7153-201ENSMUST00000117092 455 ntBASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Gm45167-201ENSMUST00000208007 322 ntBASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cpne3Q8BT60 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Gm7862-201ENSMUST00000121461 292 ntBASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Carlr-201ENSMUST00000181515 2574 ntBASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.23□□□□□ -0.13
Cpne3Q8BT60 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Gm11764-201ENSMUST00000120221 623 ntBASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Mir8098-201ENSMUST00000184011 137 ntBASIC14.22□□□□□ -0.13
Cpne3Q8BT60 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Gm5864-201ENSMUST00000202263 970 ntBASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms