Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nod1Q8BHB0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nod1Q8BHB0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nod1Q8BHB0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nod1Q8BHB0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nod1Q8BHB0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Nod1Q8BHB0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.45■□□□□ 0.06
Nod1Q8BHB0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nod1Q8BHB0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nod1Q8BHB0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Nod1Q8BHB0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Gm46209-201ENSMUST00000217912 553 ntBASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Nod1Q8BHB0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms